C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: expressed sequence AW551984
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038112 AW551984 10090 - 9:39587396-39604403 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042485 AW551984-004 39587396-39604124 protein_coding
  ENSMUST00000119722 AW551984-001 39587510-39603687 protein_coding
  ENSMUST00000128054 AW551984-008 39590592-39592246 retained_intron
  ENSMUST00000130829 AW551984-005 39600557-39603378 protein_coding
  ENSMUST00000136814 AW551984-006 39600295-39603627 retained_intron
  ENSMUST00000141370 AW551984-003 39599658-39604403 protein_coding
  ENSMUST00000147753 AW551984-007 39588962-39590986 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042485ENSMUST00000119722ENSMUST00000128054ENSMUST00000130829ENSMUST00000136814ENSMUST00000141370ENSMUST00000147753
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042485 N/A N/A N/A N/A 0.526±0.00 N/A 0.080±0.00 0.072±0.02 0.012±0.00 N/A N/A N/A N/A 0.010±0.01
ENSMUST00000119722 2.753±2.47 1.556±0.57 2.710±0.52 12.293±9.33 1.680±0.49 0.944±0.21 0.108±0.02 0.056±0.02 0.471±0.34 0.241±0.05 0.054±0.02 0.982±0.37 0.255±0.11 0.004±0.00
ENSMUST00000128054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 0.164±0.00 0.054±0.01 0.030±0.00
ENSMUST00000130829 N/A N/A N/A N/A N/A N/A 0.829±0.00 0.169±0.00 N/A N/A N/A 4.606±0.48 N/A N/A
ENSMUST00000136814 N/A 9.010±2.42 N/A N/A 3.130±0.13 2.974±1.03 N/A 0.123±0.08 0.113±0.04 0.227±0.00 0.058±0.00 4.047±2.05 N/A 0.138±0.00
ENSMUST00000141370 N/A 1.362±0.00 N/A N/A N/A 0.832±0.00 N/A 0.089±0.00 N/A 0.261±0.00 N/A 0.957±0.41 N/A 0.066±0.00
ENSMUST00000147753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.136±0.00 0.598±0.00 0.223±0.00 0.073±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0055007 IMP cardiac muscle cell differentiation
GO:0060923 IGI cardiac muscle cell fate commitment

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010183 VWA5A (1 of 5) von Willebrand factor A domain containing 5A protein_coding Danio_rerio
ENSDARG00000073905 VWA5A (2 of 5) von Willebrand factor A domain containing 5A protein_coding Danio_rerio
ENSDARG00000088917 VWA5A (3 of 5) von Willebrand factor A domain containing 5A protein_coding Danio_rerio
ENSDARG00000089373 CU459204.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000097889 VWA5A (5 of 5) von Willebrand factor A domain containing 5A protein_coding Danio_rerio
ENSG00000110002 VWA5A von Willebrand factor A domain containing 5A protein_coding Homo_sapiens

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