C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: INTS3 and NABP interacting protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038544 Inip 10090 - 4:59769637-59801589 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000095063 Inip-001 59769637-59783866 protein_coding
  ENSMUST00000107526 Inip-004 59771297-59783808 protein_coding
  ENSMUST00000128548 Inip-002 59774088-59783838 processed_transcript
  ENSMUST00000138097 Inip-003 59781007-59783849 processed_transcript
  ENSMUST00000143756 Inip-005 59772372-59801589 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095063ENSMUST00000107526ENSMUST00000128548
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095063 2.532±1.68 6.487±0.71 3.236±0.01 5.589±2.48 4.417±1.20 3.869±0.85 1.867±0.46 1.755±0.61 1.828±0.94 5.100±0.56 0.662±0.11 5.770±2.13 2.615±0.72 1.510±0.40
ENSMUST00000107526 N/A N/A N/A N/A N/A N/A N/A 1.047±0.00 2.616±0.58 N/A 0.363±0.04 2.668±0.65 2.034±1.05 1.477±0.52
ENSMUST00000128548 N/A N/A 2.459±0.43 3.048±0.92 1.869±0.00 N/A 1.005±0.07 N/A 1.494±0.58 N/A 0.362±0.09 2.150±0.84 1.093±0.20 0.712±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022E CIL_00022E_0003 CGP 4:59626211-59801589
CIL_0005X4 CIL_0005X4_0002 CGP 4:59769637-59904737

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0006281 ISS DNA repair
GO:0006974 ISS cellular response to DNA damage stimulus
GO:0010212 ISS response to ionizing radiation
GO:0070876 ISS SOSS complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028523 inip ints3 and nabp interacting protein protein_coding Danio_rerio
ENSG00000148153 INIP INTS3 and NABP interacting protein protein_coding Homo_sapiens

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