C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: trans-acting transcription factor 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038560 Sp6 10090 + 11:97013394-97024734 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047997 Sp6-001 97013394-97024734 protein_coding
  ENSMUST00000107622 Sp6-002 97018733-97024731 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungENSMUST00000107622
Transcript ID Adrenal Breast Colon Kidney Liver Lung
ENSMUST00000107622 0.015±0.00 0.147±0.01 0.018±0.00 0.087±0.00 0.008±0.00 0.231±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097B CIL_00097B_0002 VISTA 11:96441475-97042608
CIL_0007WA CIL_0007WA_0002 VISTA 11:96526222-97127190
CIL_0007RQ CIL_0007RQ_0002 VISTA 11:96583318-97187851

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 ISS DNA binding
GO:0005634 IDA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 ISS transcription from RNA polymerase II promoter
GO:0008284 IDA positive regulation of cell proliferation
GO:0042481 IMP regulation of odontogenesis
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090586 SP6 Sp6 transcription factor protein_coding Danio_rerio
ENSG00000189120 SP6 Sp6 transcription factor protein_coding Homo_sapiens

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