C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PAK1 interacting protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038683 Pak1ip1 10090 + 13:41001023-41013019 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046951 Pak1ip1-001 41001023-41013015 protein_coding
  ENSMUST00000173238 Pak1ip1-002 41001024-41008617 retained_intron
  ENSMUST00000174472 Pak1ip1-003 41001266-41013019 retained_intron
  ENSMUST00000174527 Pak1ip1-005 41001260-41008266 processed_transcript
  ENSMUST00000174551 Pak1ip1-004 41001238-41013007 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046951ENSMUST00000173238ENSMUST00000174472
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046951 22.105±3.12 N/A 29.786±5.78 22.977±7.29 13.926±4.74 11.533±3.25 11.358±3.95 17.604±1.62 33.028±18.89 11.846±1.47 14.847±0.59 16.141±5.69 58.681±10.71 13.368±3.52
ENSMUST00000173238 8.677±0.00 66.040±4.93 N/A N/A 26.445±3.00 26.228±5.36 N/A 8.194±0.00 7.502±1.78 11.759±2.00 N/A 26.318±6.36 N/A N/A
ENSMUST00000174472 6.351±0.00 26.705±4.97 N/A N/A 9.344±2.04 11.668±0.00 N/A N/A 5.575±1.48 N/A N/A 12.798±4.85 N/A 3.241±0.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097A CIL_00097A_0002 VISTA 13:40412299-41013499
CIL_00086X CIL_00086X_0002 VISTA 13:40425554-41028254
CIL_000383 CIL_000383_0002 CGP 13:41001023-41022575

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005730 IDA nucleolus
GO:0005886 IEA plasma membrane
GO:0008283 IPI cell proliferation
GO:0009968 IEA negative regulation of signal transduction
GO:0060021 IMP palate development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044488 pak1ip1 PAK1 interacting protein 1 protein_coding Danio_rerio
ENSG00000111845 PAK1IP1 PAK1 interacting protein 1 protein_coding Homo_sapiens

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