C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetratricopeptide repeat domain 16
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039021 Ttc16 10090 - 2:32757026-32775633 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000066478 Ttc16-001 32762177-32775339 protein_coding
  ENSMUST00000091059 Ttc16-005 32757026-32775383 protein_coding
  ENSMUST00000123674 Ttc16-004 32772760-32775587 retained_intron
  ENSMUST00000125891 Ttc16-002 32764129-32775633 nonsense_mediated_decay
  ENSMUST00000161089 Ttc16-007 32762263-32775330 protein_coding
  ENSMUST00000161430 Ttc16-003 32762178-32775584 protein_coding
  ENSMUST00000161950 Ttc16-006 32762263-32775339 protein_coding
  ENSMUST00000161958 Ttc16-008 32774507-32775631 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungOvaryTestisENSMUST00000066478ENSMUST00000091059ENSMUST00000125891ENSMUST00000161089ENSMUST00000161430ENSMUST00000161950
Transcript ID Lung Ovary Testis
ENSMUST00000066478 N/A N/A 3.202±0.00
ENSMUST00000091059 N/A N/A 7.722±0.00
ENSMUST00000125891 N/A N/A 1.912±0.00
ENSMUST00000161089 4.377±0.05 N/A 29.058±12.13
ENSMUST00000161430 N/A N/A 17.941±7.38
ENSMUST00000161950 3.922±0.00 2.977±0.00 14.200±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YA CIL_0008YA_0002 VISTA 2:32608279-33209524
CIL_00075N CIL_00075N_0002 CGP 2:32757026-32775633

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000167094 TTC16 tetratricopeptide repeat domain 16 protein_coding Homo_sapiens

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