C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GIPC PDZ domain containing family, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039131 Gipc2 10090 - 3:152093533-152166230 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046614 Gipc2-001 152093839-152166230 protein_coding
  ENSMUST00000128741 Gipc2-005 152093841-152107032 processed_transcript
  ENSMUST00000130196 Gipc2-006 152093882-152106580 processed_transcript
  ENSMUST00000133102 Gipc2-004 152130434-152165750 processed_transcript
  ENSMUST00000133672 Gipc2-003 152101874-152108336 retained_intron
  ENSMUST00000152283 Gipc2-002 152093533-152108522 processed_transcript
  ENSMUST00000152680 Gipc2-007 152094019-152102854 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046614ENSMUST00000128741ENSMUST00000130196ENSMUST00000133102ENSMUST00000152283ENSMUST00000152680
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046614 0.166±0.12 0.058±0.00 1.018±0.33 0.417±0.00 1.961±0.53 N/A N/A 10.240±1.92 4.045±1.53 2.294±0.65 0.070±0.03 0.507±0.26 16.883±14.85 1.903±0.00
ENSMUST00000128741 N/A N/A N/A 0.666±0.25 N/A N/A N/A N/A 0.637±0.82 N/A 0.063±0.00 0.403±0.22 N/A N/A
ENSMUST00000130196 N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.00 N/A N/A N/A N/A 4.300±0.13
ENSMUST00000133102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.208±0.00 N/A N/A N/A
ENSMUST00000152283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.076±0.02 N/A N/A
ENSMUST00000152680 0.579±0.71 N/A N/A 0.362±0.00 11.375±3.41 57.057±5.98 1.664±0.21 62.166±4.82 0.161±0.00 15.903±3.15 0.208±0.15 0.679±0.20 7.667±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YZ CIL_0008YZ_0002 VISTA 3:152003123-152605850

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009488 gipc2 GIPC PDZ domain containing family, member 2 protein_coding Danio_rerio
ENSG00000137960 GIPC2 GIPC PDZ domain containing family, member 2 protein_coding Homo_sapiens

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