C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: retinaldehyde binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039194 Rlbp1 10090 - 7:79374871-79387027 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053718 Rlbp1-201 79374871-79387027 protein_coding
  ENSMUST00000179243 Rlbp1-202 79374871-79387027 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000053718ENSMUST00000179243
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000053718 0.013±0.00 0.051±0.01 0.021±0.00 4.421±1.53 N/A N/A N/A N/A 0.042±0.03 0.177±0.01 N/A 0.564±0.33 0.117±0.05
ENSMUST00000179243 0.014±0.00 0.072±0.04 0.029±0.00 5.331±3.26 0.050±0.03 0.029±0.00 0.028±0.00 0.036±0.03 0.033±0.02 N/A 0.019±0.00 0.221±0.15 0.476±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RB CIL_0002RB_0003 CGP 7:79273201-79387027
CIL_00011C CIL_00011C_0002 CGP 7:79374871-79450265

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005502 IDA 11-cis retinal binding
GO:0005737 IEA cytoplasm
GO:0006810 IEA transport
GO:0007601 IEA visual perception
GO:0019841 IEA retinol binding
GO:0044297 IEA cell body
GO:0050896 IEA response to stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012504 rlbp1a retinaldehyde binding protein 1a protein_coding Danio_rerio
ENSDARG00000045808 rlbp1b retinaldehyde binding protein 1b protein_coding Danio_rerio
ENSG00000140522 RLBP1 retinaldehyde binding protein 1 protein_coding Homo_sapiens

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