C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CDKN1A interacting zinc finger protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039205 Ciz1 10090 + 2:32352327-32380226 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048964 Ciz1-002 32363198-32378297 protein_coding
  ENSMUST00000113331 Ciz1-005 32363805-32378303 protein_coding
  ENSMUST00000113332 Ciz1-001 32363198-32378303 protein_coding
  ENSMUST00000113334 Ciz1-004 32352327-32378297 protein_coding
  ENSMUST00000113338 Ciz1-201 32363810-32378298 protein_coding
  ENSMUST00000125482 Ciz1-015 32370909-32375538 protein_coding
  ENSMUST00000125769 Ciz1-007 32363010-32367407 processed_transcript
  ENSMUST00000125818 Ciz1-019 32375489-32380226 protein_coding
  ENSMUST00000131152 Ciz1-010 32363554-32370323 processed_transcript
  ENSMUST00000132028 Ciz1-006 32363010-32367528 protein_coding
  ENSMUST00000132290 Ciz1-014 32370062-32371750 processed_transcript
  ENSMUST00000134141 Ciz1-003 32374209-32378299 processed_transcript
  ENSMUST00000136079 Ciz1-008 32363061-32370122 protein_coding
  ENSMUST00000136325 Ciz1-009 32363433-32365851 processed_transcript
  ENSMUST00000137220 Ciz1-017 32372317-32375000 processed_transcript
  ENSMUST00000139637 Ciz1-012 32367412-32371293 protein_coding
  ENSMUST00000145635 Ciz1-020 32363163-32370046 protein_coding
  ENSMUST00000145957 Ciz1-016 32371835-32374556 processed_transcript
  ENSMUST00000147338 Ciz1-011 32363756-32364987 processed_transcript
  ENSMUST00000149184 Ciz1-018 32375108-32376390 processed_transcript
  ENSMUST00000151806 Ciz1-013 32367472-32372305 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048964ENSMUST00000113331ENSMUST00000113332ENSMUST00000113338ENSMUST00000125818ENSMUST00000132028ENSMUST00000134141ENSMUST00000149184
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048964 N/A N/A N/A N/A 15.227±0.00 14.047±3.01 N/A 11.044±1.12 6.931±0.00 N/A N/A 20.567±2.30 N/A N/A
ENSMUST00000113331 N/A N/A N/A N/A N/A 9.692±0.00 N/A N/A N/A N/A N/A N/A N/A 14.611±3.76
ENSMUST00000113332 N/A N/A 6.076±0.00 N/A N/A N/A N/A N/A 5.044±1.06 N/A 2.376±0.13 11.175±0.89 7.031±1.02 N/A
ENSMUST00000113338 12.640±0.19 N/A 7.425±0.00 14.027±1.64 N/A N/A 5.836±0.38 N/A 7.341±1.76 12.472±0.86 4.186±0.92 12.654±0.00 14.946±1.05 11.190±0.79
ENSMUST00000125818 N/A N/A N/A 44.026±0.00 N/A N/A N/A N/A N/A N/A N/A 35.880±4.79 33.405±3.31 84.165±0.00
ENSMUST00000132028 51.010±0.85 86.593±3.24 N/A 49.262±0.00 77.900±9.52 47.407±9.18 26.719±7.69 40.224±2.24 22.843±0.35 58.512±14.23 N/A 92.426±17.17 N/A 50.888±11.43
ENSMUST00000134141 N/A N/A 6.220±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 7.302±0.55 N/A N/A
ENSMUST00000149184 N/A N/A N/A N/A 39.895±0.00 N/A N/A N/A N/A N/A N/A 31.350±0.00 27.755±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088E CIL_00088E_0002 VISTA 2:31827730-32428586

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005634 IDA nucleus
GO:0008270 IEA zinc ion binding
GO:0030332 IPI cyclin binding
GO:0032298 IDA positive regulation of DNA-dependent DNA replication initiation
GO:0051457 IMP maintenance of protein location in nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089461 ciz1b cdkn1a interacting zinc finger protein 1b protein_coding Danio_rerio
ENSDARG00000089781 ciz1a cdkn1a interacting zinc finger protein 1a protein_coding Danio_rerio
ENSG00000148337 CIZ1 CDKN1A interacting zinc finger protein 1 protein_coding Homo_sapiens

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