C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tubulin-specific chaperone E
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039233 Tbce 10090 - 13:13997949-14039638 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039894 Tbce-003 13997952-14039638 protein_coding
  ENSMUST00000159239 Tbce-004 14003064-14039621 retained_intron
  ENSMUST00000159427 Tbce-010 14005189-14009844 retained_intron
  ENSMUST00000159893 Tbce-007 13997949-14039579 nonsense_mediated_decay
  ENSMUST00000159966 Tbce-009 14010385-14039612 retained_intron
  ENSMUST00000160304 Tbce-008 14014352-14039596 retained_intron
  ENSMUST00000160510 Tbce-014 13997951-14001597 retained_intron
  ENSMUST00000160553 Tbce-005 13997951-14005504 retained_intron
  ENSMUST00000160776 Tbce-006 14019275-14039617 retained_intron
  ENSMUST00000161554 Tbce-011 14005234-14009837 retained_intron
  ENSMUST00000162241 Tbce-013 14005227-14009051 retained_intron
  ENSMUST00000162326 Tbce-002 13997953-14039638 nonsense_mediated_decay
  ENSMUST00000162440 Tbce-012 14005242-14009503 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039894ENSMUST00000159239ENSMUST00000160553ENSMUST00000162241
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039894 N/A N/A 21.063±1.30 12.013±4.62 N/A N/A 3.572±0.49 3.049±0.33 16.435±6.10 N/A 7.103±0.34 14.792±0.00 8.792±1.61 3.490±1.00
ENSMUST00000159239 N/A N/A N/A N/A N/A N/A N/A 1.952±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000160553 N/A N/A N/A 12.758±0.00 N/A N/A N/A N/A N/A N/A N/A 23.012±0.00 19.814±0.00 N/A
ENSMUST00000162241 7.123±0.57 7.651±1.61 N/A N/A 9.465±2.30 7.133±0.00 4.565±0.00 5.472±0.68 N/A 10.024±0.62 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000226 IMP microtubule cytoskeleton organization
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006457 TAS protein folding
GO:0007021 TAS tubulin complex assembly
GO:0007023 ISS post-chaperonin tubulin folding pathway
GO:0007409 IMP axonogenesis
GO:0008344 IMP adult locomotory behavior
GO:0009791 IMP post-embryonic development
GO:0014889 IMP muscle atrophy
GO:0048589 IMP developmental growth
GO:0048936 IMP peripheral nervous system neuron axonogenesis
GO:0051082 TAS unfolded protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044634 tbce tubulin folding cofactor E protein_coding Danio_rerio
ENSG00000116957 TBCE tubulin folding cofactor E protein_coding Homo_sapiens

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