C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: contactin associated protein-like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039419 Cntnap2 10090 + 6:45060061-47301369 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000060839 Cntnap2-002 47244402-47299570 protein_coding
  ENSMUST00000114641 Cntnap2-001 45060061-47301369 protein_coding
  ENSMUST00000150737 Cntnap2-003 47045060-47095560 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060839ENSMUST00000114641ENSMUST00000150737
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060839 0.905±0.62 0.453±0.11 12.040±2.40 21.068±10.45 0.280±0.18 0.100±0.03 N/A 0.072±0.04 0.429±0.28 N/A 5.067±0.72 0.778±0.37 0.180±0.18 6.409±2.60
ENSMUST00000114641 N/A 0.098±0.02 N/A 2.820±0.34 0.013±0.00 0.139±0.06 0.013±0.01 0.040±0.02 0.001±0.00 0.028±0.00 N/A 0.028±0.00 0.011±0.00 0.456±0.00
ENSMUST00000150737 0.198±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.832±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XR CIL_0004XR_0002 CGP 6:43345001-47301369

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005769 ISS early endosome
GO:0005794 ISS Golgi apparatus
GO:0007155 TAS cell adhesion
GO:0007612 IEA learning
GO:0008038 TAS neuron recognition
GO:0008076 IDA voltage-gated potassium channel complex
GO:0009986 ISS cell surface
GO:0016020 ISS membrane
GO:0019899 ISS enzyme binding
GO:0021756 IEA striatum development
GO:0021761 IEP limbic system development
GO:0021794 IEA thalamus development
GO:0021987 IEA cerebral cortex development
GO:0030424 ISS axon
GO:0030425 ISS dendrite
GO:0030534 IEA adult behavior
GO:0030673 ISS axolemma
GO:0031175 IGI neuron projection development
GO:0034613 IMP cellular protein localization
GO:0035176 IEA social behavior
GO:0043025 ISS neuronal cell body
GO:0043204 ISS perikaryon
GO:0044224 IDA juxtaparanode region of axon
GO:0045163 IMP clustering of voltage-gated potassium channels
GO:0071109 IEA superior temporal gyrus development
GO:0071205 IMP protein localization to juxtaparanode region of axon
GO:0071625 IEA vocalization behavior

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058969 cntnap2a contactin associated protein-like 2a protein_coding Danio_rerio
ENSDARG00000074351 CNTNAP2 (2 of 4) contactin associated protein-like 2 protein_coding Danio_rerio
ENSDARG00000074558 cntnap2b contactin associated protein-like 2b protein_coding Danio_rerio
ENSG00000174469 CNTNAP2 contactin associated protein-like 2 protein_coding Homo_sapiens

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