C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: striatin interacting protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039629 Strip2 10090 + 6:29917013-29959681 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046028 Strip2-001 29917013-29959681 protein_coding
  ENSMUST00000115224 Strip2-005 29917013-29947076 protein_coding
  ENSMUST00000130969 Strip2-003 29917013-29957768 retained_intron
  ENSMUST00000137068 Strip2-002 29917013-29945554 retained_intron
  ENSMUST00000151738 Strip2-004 29917208-29959675 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046028ENSMUST00000115224ENSMUST00000130969ENSMUST00000137068ENSMUST00000151738
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046028 1.307±0.66 0.207±0.18 0.117±0.02 0.628±0.29 2.112±0.69 0.719±0.26 12.913±0.33 0.652±0.14 0.148±0.08 0.447±0.13 0.131±0.03 0.594±0.21 0.335±0.39 2.650±1.16
ENSMUST00000115224 N/A 0.114±0.03 N/A N/A 0.833±0.34 0.215±0.02 N/A N/A 0.014±0.00 0.189±0.00 N/A 0.316±0.06 0.048±0.03 0.887±0.38
ENSMUST00000130969 N/A 0.103±0.05 N/A 0.304±0.00 0.348±0.00 0.216±0.00 N/A 0.152±0.00 0.022±0.00 N/A N/A 0.276±0.06 0.103±0.05 N/A
ENSMUST00000137068 N/A N/A 0.080±0.00 N/A N/A N/A N/A N/A 0.056±0.00 N/A N/A 0.232±0.00 0.029±0.00 0.936±0.31
ENSMUST00000151738 N/A N/A 0.055±0.00 2.624±0.00 N/A 0.497±0.07 N/A 0.183±0.00 0.033±0.02 0.184±0.00 0.151±0.07 0.567±0.24 0.228±0.19 0.255±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YE CIL_0001YE_0002 CGP 6:29768011-29959681

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 ISS cytoplasm
GO:0007010 ISS cytoskeleton organization
GO:0008360 ISS regulation of cell shape
GO:0016477 ISS cell migration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059003 strip2 striatin interacting protein 2 protein_coding Danio_rerio
ENSG00000128578 STRIP2 striatin interacting protein 2 protein_coding Homo_sapiens

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