C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBC1 domain family, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039813 Tbc1d2 10090 - 4:46604390-46650209 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000084621 Tbc1d2-001 46604390-46650209 protein_coding
  ENSMUST00000107750 Tbc1d2-002 46632580-46650209 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000084621ENSMUST00000107750
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000084621 3.571±2.26 1.901±0.96 6.380±0.28 0.293±0.02 3.842±0.99 18.127±1.65 0.349±0.18 1.932±0.65 0.413±0.14 3.279±0.80 0.287±0.11 1.704±0.68 6.487±2.45 1.089±0.72
ENSMUST00000107750 N/A N/A N/A 0.815±0.00 N/A N/A N/A N/A N/A N/A 0.076±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AQ CIL_0009AQ_0002 VISTA 4:46052102-46653592
CIL_000853 CIL_000853_0002 VISTA 4:46066953-46671362
CIL_0009AR CIL_0009AR_0002 VISTA 4:46066953-46668597
CIL_00029Y CIL_00029Y_0002 CGP 4:46536937-46650209
CIL_00029Z CIL_00029Z_0002 CGP 4:46604390-46991873

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005097 ISS Rab GTPase activator activity
GO:0030054 ISS cell junction
GO:0031410 ISS cytoplasmic vesicle
GO:0032851 ISS positive regulation of Rab GTPase activity
GO:0045296 IEA cadherin binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071304 TBC1D2 TBC1 domain family, member 2 protein_coding Danio_rerio
ENSG00000095383 TBC1D2 TBC1 domain family, member 2 protein_coding Homo_sapiens

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