C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tudor domain containing 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040140 Tdrd6 10090 - 17:43615335-43630299 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045717 Tdrd6-001 43615339-43630299 protein_coding
  ENSMUST00000162232 Tdrd6-002 43615559-43620485 processed_transcript
  ENSMUST00000168073 Tdrd6-201 43615335-43630299 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045717ENSMUST00000162232ENSMUST00000168073
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045717 0.011±0.01 0.006±0.00 0.135±0.00 0.010±0.01 0.005±0.00 0.007±0.00 0.020±0.01 0.002±0.00 0.007±0.00 0.006±0.00 0.015±0.01 0.006±0.00 17.367±5.34
ENSMUST00000162232 N/A 0.208±0.00 N/A N/A 0.245±0.00 N/A 0.158±0.05 0.087±0.02 0.116±0.00 0.116±0.02 0.318±0.00 0.145±0.00 N/A
ENSMUST00000168073 0.006±0.00 0.006±0.00 0.129±0.01 0.010±0.01 0.005±0.00 0.007±0.00 0.015±0.01 0.009±0.01 0.007±0.00 0.006±0.00 0.015±0.01 0.006±0.00 34.484±11.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BB CIL_0008BB_0002 VISTA 17:43029588-43630220

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0007281 IDA germ cell development
GO:0030529 IDA ribonucleoprotein complex
GO:0043186 IDA P granule

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070052 tdrd6 tudor domain containing 6 protein_coding Danio_rerio
ENSG00000180113 TDRD6 tudor domain containing 6 protein_coding Homo_sapiens

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