C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger homeobox 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040721 Zfhx2 10090 - 14:55060262-55092324 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036328 Zfhx2-001 55060262-55092324 protein_coding
  ENSMUST00000176665 Zfhx2-002 55066207-55072234 retained_intron
  ENSMUST00000185430 Zfhx2-004 55074569-55080452 retained_intron
  ENSMUST00000188534 Zfhx2-003 55089572-55092042 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000036328ENSMUST00000185430
Transcript ID Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000036328 0.969±0.00 8.715±5.64 1.055±0.16 0.240±0.07 0.596±0.05 0.484±0.07 0.652±0.06 0.651±0.16 2.305±0.00 1.040±0.60
ENSMUST00000185430 N/A 5.325±0.00 N/A N/A N/A 3.831±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090C CIL_00090C_0002 VISTA 14:54638004-55241428
CIL_0009BW CIL_0009BW_0002 VISTA 14:54696106-55297707
CIL_0008Q4 CIL_0008Q4_0002 VISTA 14:54696894-55297224
CIL_0008QH CIL_0008QH_0002 VISTA 14:54703667-55304830

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0030534 IMP adult behavior
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088880 zfhx2 zinc finger homeobox 2 protein_coding Danio_rerio
ENSG00000136367 ZFHX2 zinc finger homeobox 2 protein_coding Homo_sapiens

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