C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BSD domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040859 Bsdc1 10090 + 4:129461581-129488498 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048162 Bsdc1-001 129461581-129488498 protein_coding
  ENSMUST00000131741 Bsdc1-008 129461684-129470174 retained_intron
  ENSMUST00000133083 Bsdc1-004 129461687-129465963 retained_intron
  ENSMUST00000138013 Bsdc1-003 129461836-129466990 protein_coding
  ENSMUST00000145168 Bsdc1-007 129471873-129473912 retained_intron
  ENSMUST00000149587 Bsdc1-002 129461672-129466990 processed_transcript
  ENSMUST00000153591 Bsdc1-005 129464542-129465542 processed_transcript
  ENSMUST00000154368 Bsdc1-006 129461684-129466978 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048162ENSMUST00000131741
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048162 10.225±0.66 6.891±2.41 6.458±3.15 6.582±1.32 4.347±1.66 12.538±3.07 6.727±1.78 9.173±1.83 16.264±9.66 9.339±1.41 5.060±2.74 7.087±1.64 6.101±2.06 11.236±2.66
ENSMUST00000131741 N/A N/A N/A 0.730±0.16 1.004±0.00 N/A N/A N/A N/A N/A N/A 1.294±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AA CIL_0008AA_0002 VISTA 4:129413466-130014337

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052623 bsdc1 BSD domain containing 1 protein_coding Danio_rerio
ENSG00000160058 BSDC1 BSD domain containing 1 protein_coding Homo_sapiens

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