C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: F-box and WD-40 domain protein 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040913 Fbxw4 10090 - 19:45578254-45660312 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046869 Fbxw4-001 45578254-45660312 protein_coding
  ENSMUST00000159590 Fbxw4-003 45630875-45640803 protein_coding
  ENSMUST00000160003 Fbxw4-010 45578795-45591842 protein_coding
  ENSMUST00000160018 Fbxw4-006 45578449-45593499 protein_coding
  ENSMUST00000160438 Fbxw4-008 45578912-45592661 protein_coding
  ENSMUST00000160718 Fbxw4-004 45579762-45631139 retained_intron
  ENSMUST00000161039 Fbxw4-011 45578797-45579890 retained_intron
  ENSMUST00000161556 Fbxw4-005 45591461-45631139 retained_intron
  ENSMUST00000162433 Fbxw4-007 45578614-45593467 protein_coding
  ENSMUST00000162879 Fbxw4-009 45578841-45591842 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046869ENSMUST00000159590ENSMUST00000160003ENSMUST00000161039ENSMUST00000162433ENSMUST00000162879
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046869 7.667±0.64 14.896±1.99 7.789±0.49 5.646±1.05 9.707±3.88 8.243±2.42 3.710±1.19 4.639±0.87 4.962±1.51 13.263±2.23 3.928±1.20 13.621±1.37 1.732±0.60 3.254±0.74
ENSMUST00000159590 N/A N/A N/A 14.868±0.00 N/A N/A N/A N/A N/A N/A N/A 18.434±0.00 6.747±2.54 N/A
ENSMUST00000160003 N/A 85.157±6.66 N/A N/A N/A N/A N/A N/A 15.532±0.98 N/A N/A 84.928±18.59 N/A N/A
ENSMUST00000161039 N/A 46.973±0.00 N/A N/A N/A 18.352±0.07 N/A N/A 10.341±1.15 N/A N/A N/A N/A N/A
ENSMUST00000162433 N/A N/A N/A N/A N/A N/A 5.910±1.02 N/A 4.680±0.69 17.716±0.00 N/A 28.504±5.13 N/A N/A
ENSMUST00000162879 N/A N/A N/A N/A 18.482±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZR CIL_0007ZR_0002 VISTA 19:45042853-45643685
CIL_00089J CIL_00089J_0002 VISTA 19:45175437-45776961
CIL_000942 CIL_000942_0002 VISTA 19:45193585-45794869
CIL_00099F CIL_00099F_0002 VISTA 19:45434459-46035623
CIL_00099E CIL_00099E_0002 VISTA 19:45446900-46047683
CIL_0005N9 CIL_0005N9_0002 CGP 19:45578254-45742915

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002053 IMP positive regulation of mesenchymal cell proliferation
GO:0016055 IEA Wnt signaling pathway
GO:0042733 IMP embryonic digit morphogenesis
GO:0051216 IMP cartilage development
GO:0060173 IGI limb development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033551 fbxw4 F-box and WD-40 domain protein 4 protein_coding Danio_rerio
ENSG00000107829 FBXW4 F-box and WD repeat domain containing 4 protein_coding Homo_sapiens

Loading