C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho guanine nucleotide exchange factor (GEF) 38
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040969 Arhgef38 10090 - 3:133112278-133234949 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000054105 Arhgef38-201 133116432-133137302 protein_coding
  ENSMUST00000070741 Arhgef38-002 133159509-133234889 retained_intron
  ENSMUST00000147041 Arhgef38-001 133112278-133234889 protein_coding
  ENSMUST00000161022 Arhgef38-202 133159535-133234889 protein_coding
  ENSMUST00000161932 Arhgef38-003 133172880-133234949 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054105ENSMUST00000147041ENSMUST00000161022ENSMUST00000161932
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054105 0.276±0.00 N/A N/A 0.398±0.18 N/A N/A N/A 0.009±0.00 N/A N/A 0.106±0.00 N/A 0.238±0.00
ENSMUST00000147041 0.105±0.07 0.002±0.00 0.007±0.00 0.134±0.05 2.322±0.49 0.018±0.01 0.679±0.23 0.006±0.00 3.771±0.16 0.005±0.00 0.208±0.11 0.004±0.00 0.051±0.00
ENSMUST00000161022 N/A N/A N/A N/A N/A N/A N/A 0.005±0.00 N/A N/A 0.302±0.00 N/A N/A
ENSMUST00000161932 0.161±0.00 N/A N/A 0.243±0.03 N/A N/A N/A N/A N/A N/A 0.526±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0032321 IEA positive regulation of Rho GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002463 CU074314.1 Uncharacterized protein protein_coding Danio_rerio

Loading