C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: H2A histone family, member V
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041126 H2afv 10090 - 11:6427229-6444443 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000093346 H2afv-002 6428138-6444352 protein_coding
  ENSMUST00000109737 H2afv-001 6427229-6444443 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000093346ENSMUST00000109737
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000093346 18.648±7.24 N/A 23.831±0.87 45.909±10.72 12.326±1.62 N/A 15.127±1.03 19.192±1.66 27.864±4.17 N/A 15.512±1.41 75.022±48.67 35.656±21.09 12.022±8.36
ENSMUST00000109737 22.218±10.37 23.708±4.44 22.729±4.60 35.256±23.47 15.641±10.18 44.772±9.84 15.211±2.68 30.165±8.96 22.927±5.40 36.092±8.26 11.405±1.37 47.963±26.70 8.057±6.65 4.855±2.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SB CIL_0000SB_0002 CGP 11:6415443-6444443
CIL_0007BS CIL_0007BS_0003 CGP 11:6427229-6475917

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042502 h2afvb H2A histone family, member Vb protein_coding Danio_rerio
ENSDARG00000068820 h2afva H2A histone family, member Va protein_coding Danio_rerio
ENSG00000105968 H2AFV H2A histone family, member V protein_coding Homo_sapiens

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