C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin-like domain containing CTD phosphatase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041231 Ublcp1 10090 - 11:44454571-44470498 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102795 Ublcp1-004 44454571-44470498 protein_coding
  ENSMUST00000129054 Ublcp1-005 44454573-44460830 processed_transcript
  ENSMUST00000136709 Ublcp1-001 44455549-44464025 processed_transcript
  ENSMUST00000150032 Ublcp1-006 44465628-44467074 processed_transcript
  ENSMUST00000151875 Ublcp1-003 44454573-44458242 processed_transcript
  ENSMUST00000156551 Ublcp1-002 44456253-44461353 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102795ENSMUST00000129054
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102795 6.480±3.15 2.176±0.49 15.150±3.40 12.917±1.34 3.376±0.96 4.170±1.07 6.614±0.52 7.810±1.04 10.017±7.23 4.666±1.12 6.678±1.45 5.230±3.50 18.382±5.66 3.451±1.04
ENSMUST00000129054 3.366±0.80 4.018±0.00 N/A 5.516±1.48 5.625±2.31 2.457±0.24 1.433±0.25 3.538±0.82 4.155±1.80 N/A 1.781±0.33 7.369±2.16 8.599±0.91 2.154±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008O4 CIL_0008O4_0002 VISTA 11:44325594-44926697
CIL_0008X2 CIL_0008X2_0002 VISTA 11:44334332-44935609
CIL_00087L CIL_00087L_0002 VISTA 11:44356475-44957869
CIL_0005EZ CIL_0005EZ_0002 CGP 11:44400063-44470498

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0005730 IEA nucleolus
GO:0008150 ND biological_process
GO:0016311 IEA dephosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044492 ublcp1 ubiquitin-like domain containing CTD phosphatase 1 protein_coding Danio_rerio
ENSG00000164332 UBLCP1 ubiquitin-like domain containing CTD phosphatase 1 protein_coding Homo_sapiens

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