C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: signal sequence receptor, beta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041355 Ssr2 10090 + 3:88579671-88588397 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035785 Ssr2-201 88579671-88588397 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035785
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035785 20.841±1.07 20.470±8.28 39.555±0.00 24.200±11.36 8.777±1.74 31.506±21.58 4.181±0.41 33.827±14.88 40.869±32.69 30.925±14.85 17.733±0.00 33.953±23.86 170.528±4.48 31.116±16.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008P5 CIL_0008P5_0002 VISTA 3:88218217-88823366
CIL_000898 CIL_000898_0002 VISTA 3:88224783-88827970

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005230 ssr2 signal sequence receptor, beta protein_coding Danio_rerio
ENSG00000163479 SSR2 signal sequence receptor, beta (translocon-associated protein beta) protein_coding Homo_sapiens

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