C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: progestin and adipoQ receptor family member VI
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041423 Paqr6 10090 + 3:88364584-88368541 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000123200 Paqr6-004 88364593-88365802 retained_intron
  ENSMUST00000147818 Paqr6-005 88366722-88368541 retained_intron
  ENSMUST00000147948 Paqr6-002 88364584-88368033 protein_coding
  ENSMUST00000147991 Paqr6-001 88364589-88368541 protein_coding
  ENSMUST00000149640 Paqr6-003 88364591-88367243 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000123200ENSMUST00000147818ENSMUST00000147948ENSMUST00000147991ENSMUST00000149640
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000123200 1.115±0.00 N/A 3.815±0.00 N/A 2.311±0.00 N/A N/A N/A 1.570±1.25 N/A 0.098±0.03 0.710±0.00 0.043±0.00 N/A
ENSMUST00000147818 0.577±0.21 0.954±0.17 7.243±1.17 0.589±0.41 1.542±0.11 0.632±0.35 0.326±0.17 0.271±0.06 0.594±0.91 1.756±0.50 0.267±0.09 1.707±0.55 0.188±0.13 1.047±0.68
ENSMUST00000147948 1.705±0.40 3.631±1.24 10.531±2.72 0.169±0.00 3.854±1.33 1.536±0.52 0.882±0.51 0.743±0.21 1.322±1.34 4.149±0.34 0.398±0.11 4.546±1.25 0.238±0.11 0.877±0.22
ENSMUST00000147991 0.574±0.26 0.659±0.25 3.591±0.92 1.719±2.18 2.357±0.37 0.726±0.11 0.300±0.15 0.311±0.04 0.422±0.43 1.436±0.26 0.122±0.03 4.170±1.51 0.200±0.00 0.420±0.11
ENSMUST00000149640 N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.01 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JO CIL_0008JO_0002 VISTA 3:87838105-88441065
CIL_0008P5 CIL_0008P5_0002 VISTA 3:88218217-88823366
CIL_000898 CIL_000898_0002 VISTA 3:88224783-88827970
CIL_00064M CIL_00064M_0002 CGP 3:88336260-88368541

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 IBA receptor activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041483 paqr6 progestin and adipoQ receptor family member VI protein_coding Danio_rerio
ENSG00000160781 PAQR6 progestin and adipoQ receptor family member VI protein_coding Homo_sapiens

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