C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: small muscle protein, X-linked
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041476 Smpx 10090 + X:157698910-157752591 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038007 Smpx-001 157698910-157752591 nonsense_mediated_decay
  ENSMUST00000112520 Smpx-003 157702598-157752241 protein_coding
  ENSMUST00000112521 Smpx-005 157699127-157752589 protein_coding
  ENSMUST00000126418 Smpx-007 157720426-157752283 retained_intron
  ENSMUST00000132805 Smpx-006 157714273-157752211 retained_intron
  ENSMUST00000136141 Smpx-002 157698910-157703012 protein_coding
  ENSMUST00000147283 Smpx-004 157699260-157752214 nonsense_mediated_decay
  ENSMUST00000190091 Smpx-201 157698973-157752589 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038007ENSMUST00000112520ENSMUST00000112521ENSMUST00000136141ENSMUST00000147283ENSMUST00000190091
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038007 N/A 0.670±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112520 N/A 0.724±0.36 N/A N/A N/A 0.697±0.00 N/A N/A 0.029±0.00 N/A N/A 0.446±0.01 0.038±0.00 N/A
ENSMUST00000112521 0.127±0.00 0.976±0.52 N/A 0.069±0.04 18.441±4.88 0.713±0.29 76.426±6.80 0.842±0.42 0.216±0.20 3.324±1.99 64.808±5.33 1.941±1.76 0.629±0.52 1.045±0.00
ENSMUST00000136141 N/A N/A N/A N/A N/A 0.402±0.23 N/A 0.319±0.18 N/A N/A N/A 1.776±0.27 N/A N/A
ENSMUST00000147283 N/A N/A 0.023±0.00 N/A N/A 0.354±0.18 N/A N/A 0.090±0.06 N/A N/A N/A 0.426±0.00 N/A
ENSMUST00000190091 N/A 0.542±0.27 0.062±0.01 0.088±0.05 5.023±1.14 0.712±0.10 41.646±3.34 0.664±0.22 0.084±0.09 1.621±1.16 168.758±5.09 2.748±1.82 0.153±0.15 6.133±2.90

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005927 IDA muscle tendon junction
GO:0031430 IDA M band
GO:0043034 IDA costamere
GO:0043292 IDA contractile fiber

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045302 smpx small muscle protein, X-linked protein_coding Danio_rerio
ENSG00000091482 SMPX small muscle protein, X-linked protein_coding Homo_sapiens

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