C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: patched domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041552 Ptchd1 10090 - X:155573455-155623814 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038665 Ptchd1-001 155573455-155623325 protein_coding
  ENSMUST00000141356 Ptchd1-002 155586808-155623814 processed_transcript
  ENSMUST00000170236 Ptchd1-003 155573541-155623118 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038665ENSMUST00000141356ENSMUST00000170236
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038665 0.086±0.01 0.092±0.01 0.449±0.02 0.151±0.07 0.094±0.05 0.043±0.02 0.073±0.03 0.012±0.01 0.139±0.01 0.025±0.01 0.123±0.05 0.028±0.03 0.134±0.09
ENSMUST00000141356 0.220±0.04 0.196±0.07 N/A 0.113±0.00 0.119±0.04 N/A 0.116±0.04 N/A 0.160±0.05 N/A 0.119±0.05 N/A N/A
ENSMUST00000170236 0.197±0.00 N/A 0.247±0.00 0.115±0.09 0.139±0.08 0.036±0.00 0.066±0.01 0.011±0.00 0.116±0.03 0.026±0.00 0.040±0.02 0.024±0.01 0.042±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005886 IEA plasma membrane
GO:0007224 IEA smoothened signaling pathway
GO:0008158 IEA hedgehog receptor activity
GO:0016021 IEA integral component of membrane
GO:0050890 IEA cognition

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018066 ptchd1 patched domain containing 1 protein_coding Danio_rerio
ENSG00000165186 PTCHD1 patched domain containing 1 protein_coding Homo_sapiens

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