C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cDNA sequence BC006965
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041674 BC006965 10090 - 11:112663927-112781976 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000124028 BC006965-001 112663927-112711356 processed_transcript
  ENSMUST00000125873 BC006965-011 112677290-112691359 processed_transcript
  ENSMUST00000131057 BC006965-002 112687643-112711341 processed_transcript
  ENSMUST00000133231 BC006965-014 112669201-112677220 processed_transcript
  ENSMUST00000137081 BC006965-004 112687645-112781976 processed_transcript
  ENSMUST00000139027 BC006965-005 112691324-112711339 processed_transcript
  ENSMUST00000141399 BC006965-017 112664839-112669398 processed_transcript
  ENSMUST00000142282 BC006965-016 112670187-112672210 processed_transcript
  ENSMUST00000142413 BC006965-008 112684575-112711363 processed_transcript
  ENSMUST00000143060 BC006965-007 112684682-112711356 processed_transcript
  ENSMUST00000143550 BC006965-015 112664815-112672210 processed_transcript
  ENSMUST00000143760 BC006965-009 112672174-112711340 processed_transcript
  ENSMUST00000144036 BC006965-006 112684464-112691518 processed_transcript
  ENSMUST00000148724 BC006965-018 112718876-112744277 processed_transcript
  ENSMUST00000151650 BC006965-013 112677406-112711362 processed_transcript
  ENSMUST00000154379 BC006965-012 112672087-112710922 processed_transcript
  ENSMUST00000155766 BC006965-003 112687643-112711341 processed_transcript
  ENSMUST00000156388 BC006965-010 112677481-112711340 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000124028ENSMUST00000125873ENSMUST00000131057ENSMUST00000133231ENSMUST00000137081ENSMUST00000139027ENSMUST00000141399ENSMUST00000143060ENSMUST00000143760ENSMUST00000144036ENSMUST00000148724ENSMUST00000151650ENSMUST00000154379ENSMUST00000155766ENSMUST00000156388
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000124028 0.036±0.01 0.015±0.00 N/A 1.139±0.29 0.082±0.03 0.016±0.00 0.023±0.01 0.024±0.01 0.033±0.00 0.027±0.01 0.058±0.03 0.007±0.00 0.043±0.00
ENSMUST00000125873 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.095±0.00 0.112±0.00 N/A 0.066±0.01
ENSMUST00000131057 N/A N/A N/A N/A N/A N/A N/A 0.019±0.01 N/A 0.046±0.00 N/A N/A 0.069±0.00
ENSMUST00000133231 N/A 0.031±0.00 N/A N/A 0.229±0.00 N/A N/A N/A 0.063±0.00 0.054±0.02 N/A 0.052±0.00 0.111±0.00
ENSMUST00000137081 0.079±0.00 0.018±0.00 N/A N/A 0.150±0.00 0.042±0.02 N/A 0.078±0.03 N/A 0.083±0.06 N/A 0.011±0.00 0.141±0.05
ENSMUST00000139027 N/A N/A N/A 1.630±0.00 0.270±0.15 N/A N/A 0.036±0.00 N/A 0.050±0.00 0.615±0.00 0.085±0.00 0.212±0.13
ENSMUST00000141399 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.188±0.00 0.661±0.00 0.159±0.13 1.299±0.00
ENSMUST00000143060 N/A N/A N/A N/A N/A N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A
ENSMUST00000143760 N/A N/A 0.203±0.00 N/A 0.212±0.10 N/A 0.062±0.02 0.035±0.00 N/A 0.100±0.05 0.054±0.00 N/A 0.194±0.12
ENSMUST00000144036 N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A N/A 0.072±0.00 N/A
ENSMUST00000148724 N/A N/A N/A N/A N/A 0.077±0.00 0.226±0.00 N/A N/A N/A 0.345±0.25 N/A N/A
ENSMUST00000151650 N/A N/A 0.145±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154379 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A 0.091±0.00 0.185±0.00
ENSMUST00000155766 N/A 0.027±0.00 N/A N/A N/A N/A 0.034±0.00 0.011±0.00 N/A 0.034±0.00 0.032±0.00 N/A N/A
ENSMUST00000156388 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.110±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072G CIL_00072G_0002 CGP 11:111066164-112787760
CIL_00096X CIL_00096X_0002 VISTA 11:112111865-112713667
CIL_00096Y CIL_00096Y_0002 VISTA 11:112480251-113081039

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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