C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transient receptor potential cation channel, subfamily C, member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041710 Trpc5 10090 - X:144381671-144688180 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040184 Trpc5-001 144381671-144688180 protein_coding
  ENSMUST00000148240 Trpc5-002 144418675-144688003 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainHeartKidneyLiverOvaryPlacentaTestisENSMUST00000040184ENSMUST00000148240
Transcript ID Adipose Adrenal Bladder Brain Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000040184 0.018±0.01 0.147±0.06 0.003±0.00 1.488±0.00 0.006±0.00 0.053±0.03 0.025±0.01 0.124±0.04 0.015±0.01 0.030±0.02
ENSMUST00000148240 N/A 0.031±0.00 N/A N/A N/A 0.045±0.01 N/A 0.191±0.10 0.014±0.00 0.005±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007A4 CIL_0007A4_0002 CGP X:144381671-145122411

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005262 IEA calcium channel activity
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0034704 IEA calcium channel complex
GO:0070588 IEA calcium ion transmembrane transport
GO:0070679 IDA inositol 1,4,5 trisphosphate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060837 trpc5b transient receptor potential cation channel, subfamily C, member 5b protein_coding Danio_rerio
ENSDARG00000070504 trpc5a transient receptor potential cation channel, subfamily C, member 5a protein_coding Danio_rerio
ENSG00000072315 TRPC5 transient receptor potential cation channel, subfamily C, member 5 protein_coding Homo_sapiens

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