C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pleckstrin homology domain containing, family A member 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041757 Plekha6 10090 + 1:133181321-133303435 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038295 Plekha6-001 133246106-133303435 protein_coding
  ENSMUST00000105082 Plekha6-201 133246097-133303435 protein_coding
  ENSMUST00000186917 Plekha6-002 133259009-133301216 protein_coding
  ENSMUST00000187285 Plekha6-004 133181321-133301219 protein_coding
  ENSMUST00000187299 Plekha6-005 133274248-133281811 protein_coding
  ENSMUST00000189598 Plekha6-010 133274254-133284955 protein_coding
  ENSMUST00000190186 Plekha6-003 133272217-133301487 protein_coding
  ENSMUST00000190208 Plekha6-006 133297951-133301617 retained_intron
  ENSMUST00000190694 Plekha6-009 133269456-133272334 processed_transcript
  ENSMUST00000190884 Plekha6-007 133291750-133294226 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038295ENSMUST00000105082ENSMUST00000186917ENSMUST00000187285ENSMUST00000190186ENSMUST00000190208
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038295 N/A N/A N/A 13.359±3.96 N/A N/A 9.453±0.82 3.304±0.00 0.748±0.64 1.437±0.00 0.861±0.21 N/A 5.133±0.00 N/A
ENSMUST00000105082 4.044±1.38 1.710±0.30 26.197±1.89 N/A 4.765±1.79 43.337±5.90 4.713±1.62 19.511±2.15 3.111±2.17 8.337±0.45 0.349±0.11 2.313±0.84 4.533±0.37 N/A
ENSMUST00000186917 N/A 1.062±0.06 N/A N/A 2.836±0.00 17.236±3.83 N/A N/A 2.441±0.69 N/A N/A 3.211±1.08 13.053±4.90 13.122±3.62
ENSMUST00000187285 N/A 1.216±0.40 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.957±0.00
ENSMUST00000190186 1.794±0.31 1.632±0.47 N/A 18.884±0.00 3.564±0.96 30.334±3.65 3.939±0.01 12.219±2.07 2.723±1.66 4.832±1.61 N/A 3.549±1.19 13.269±11.16 12.050±7.48
ENSMUST00000190208 2.818±0.39 N/A 15.543±0.00 10.319±0.38 4.244±0.47 27.710±2.11 6.900±0.00 N/A 2.373±1.44 3.823±0.00 N/A 3.355±0.29 3.525±0.46 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084Z CIL_00084Z_0002 VISTA 1:132779893-133380922

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020328 PLEKHA6 pleckstrin homology domain containing, family A member 6 protein_coding Danio_rerio
ENSG00000143850 PLEKHA6 pleckstrin homology domain containing, family A member 6 protein_coding Homo_sapiens

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