C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polymerase (DNA-directed), delta interacting protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041815 Poldip3 10090 - 15:83125978-83149384 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058793 Poldip3-001 83125978-83149384 protein_coding
  ENSMUST00000100375 Poldip3-003 83125978-83149331 protein_coding
  ENSMUST00000129372 Poldip3-005 83133170-83149301 protein_coding
  ENSMUST00000135013 Poldip3-006 83133265-83135911 retained_intron
  ENSMUST00000149802 Poldip3-002 83135688-83149329 retained_intron
  ENSMUST00000150926 Poldip3-004 83137828-83149336 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058793ENSMUST00000100375
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058793 31.934±8.07 30.839±3.86 25.465±2.49 20.569±8.17 23.853±7.77 31.607±0.80 7.656±0.64 21.653±0.90 16.818±2.88 27.683±1.34 3.906±0.63 41.927±11.94 43.406±12.50 9.831±4.16
ENSMUST00000100375 N/A 5.357±0.88 N/A 3.453±0.85 4.074±0.00 N/A 1.535±0.00 N/A 3.921±1.19 N/A 1.182±0.52 8.046±1.81 10.835±5.07 9.818±3.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004LM CIL_0004LM_0002 CGP 15:83125978-83172592

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005737 IEA cytoplasm
GO:0016973 IDA poly(A)+ mRNA export from nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091032 POLDIP3 polymerase (DNA-directed), delta interacting protein 3 protein_coding Danio_rerio
ENSG00000100227 POLDIP3 polymerase (DNA-directed), delta interacting protein 3 protein_coding Homo_sapiens

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