C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: importin 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041879 Ipo9 10090 - 1:135382312-135430499 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041023 Ipo9-001 135382312-135430499 protein_coding
  ENSMUST00000159017 Ipo9-008 135394165-135403455 retained_intron
  ENSMUST00000159089 Ipo9-010 135388616-135389793 retained_intron
  ENSMUST00000159173 Ipo9-005 135408064-135430419 nonsense_mediated_decay
  ENSMUST00000159487 Ipo9-014 135386393-135387559 retained_intron
  ENSMUST00000161032 Ipo9-003 135384473-135430458 nonsense_mediated_decay
  ENSMUST00000161135 Ipo9-006 135406467-135420042 retained_intron
  ENSMUST00000161189 Ipo9-002 135384473-135430491 nonsense_mediated_decay
  ENSMUST00000161258 Ipo9-009 135389437-135403364 processed_transcript
  ENSMUST00000161704 Ipo9-007 135406017-135407140 retained_intron
  ENSMUST00000161750 Ipo9-012 135385809-135388549 retained_intron
  ENSMUST00000161838 Ipo9-004 135402348-135430433 nonsense_mediated_decay
  ENSMUST00000161934 Ipo9-013 135385121-135388594 protein_coding
  ENSMUST00000162858 Ipo9-011 135386288-135388700 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041023ENSMUST00000159017ENSMUST00000161032ENSMUST00000161189
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041023 7.330±0.56 N/A 6.601±0.22 14.368±2.11 3.335±0.30 2.003±0.38 2.113±0.18 3.645±0.45 3.473±2.05 3.725±0.67 3.286±0.57 5.284±1.54 6.003±1.85 1.838±0.56
ENSMUST00000159017 N/A 29.427±3.67 N/A N/A 33.434±6.99 11.735±0.00 N/A N/A 7.315±0.00 N/A N/A 45.895±8.02 N/A N/A
ENSMUST00000161032 9.800±1.24 7.369±2.26 N/A N/A 7.953±1.18 4.179±0.64 2.588±0.22 3.832±1.06 3.048±0.79 5.397±1.32 N/A 11.157±4.38 3.510±0.52 2.942±0.44
ENSMUST00000161189 25.604±1.08 10.047±1.15 9.543±1.35 26.456±5.41 19.144±5.94 4.333±0.81 6.137±1.19 9.348±2.58 6.146±3.12 9.283±0.59 3.110±0.35 21.744±5.55 12.312±5.52 6.701±1.43

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006606 IDA protein import into nucleus
GO:0006610 ISA ribosomal protein import into nucleus
GO:0008536 TAS Ran GTPase binding
GO:0008565 IEA protein transporter activity
GO:0016020 IEA membrane
GO:0042254 ISA ribosome biogenesis
GO:0042393 IDA histone binding
GO:0050821 ISA protein stabilization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016753 ipo9 importin 9 protein_coding Danio_rerio
ENSG00000198700 IPO9 importin 9 protein_coding Homo_sapiens

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