C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lectin, mannose-binding, 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041891 Lman1 10090 - 18:65980754-66022580 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048260 Lman1-001 65980754-66002637 protein_coding
  ENSMUST00000120461 Lman1-002 65983207-66002621 protein_coding
  ENSMUST00000143990 Lman1-003 65993138-66022580 protein_coding
  ENSMUST00000144793 Lman1-005 65991151-65993660 retained_intron
  ENSMUST00000150133 Lman1-004 65993591-66019778 processed_transcript
  ENSMUST00000155895 Lman1-006 65989026-65994888 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048260ENSMUST00000120461ENSMUST00000150133ENSMUST00000155895
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048260 15.191±4.18 30.440±4.58 11.978±1.48 5.681±1.85 10.803±1.55 14.403±3.15 10.437±2.42 17.803±3.20 43.415±16.52 16.528±4.89 7.954±0.26 24.234±6.39 28.384±7.71 2.329±0.94
ENSMUST00000120461 N/A 60.878±2.37 N/A N/A N/A N/A 3.265±0.00 N/A N/A 5.319±0.57 N/A 12.686±4.88 11.481±0.26 1.547±0.35
ENSMUST00000150133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.382±0.00
ENSMUST00000155895 N/A N/A N/A 12.941±0.00 N/A N/A N/A N/A N/A N/A N/A 67.310±0.00 47.330±0.23 10.197±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004H6 CIL_0004H6_0002 CGP 18:65955727-66022580
CIL_0001P5 CIL_0001P5_0002 CGP 18:65980754-66302739

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005793 IDA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IDA Golgi apparatus
GO:0006888 TAS ER to Golgi vesicle-mediated transport
GO:0007029 IMP endoplasmic reticulum organization
GO:0007030 IEA Golgi organization
GO:0010638 IEA positive regulation of organelle organization
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030017 IDA sarcomere
GO:0030134 IDA ER to Golgi transport vesicle
GO:0030246 IEA carbohydrate binding
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000074695 LMAN1 lectin, mannose-binding, 1 protein_coding Homo_sapiens

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