C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: methionyl aminopeptidase type 1D (mitochondrial)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041921 Metap1d 10090 + 2:71453276-71525194 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037210 Metap1d-001 71453276-71525191 protein_coding
  ENSMUST00000123858 Metap1d-004 71453333-71515955 processed_transcript
  ENSMUST00000124875 Metap1d-003 71453363-71524780 processed_transcript
  ENSMUST00000138873 Metap1d-005 71510258-71517152 processed_transcript
  ENSMUST00000139045 Metap1d-002 71453351-71525194 processed_transcript
  ENSMUST00000148164 Metap1d-006 71515412-71516284 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037210ENSMUST00000123858ENSMUST00000124875ENSMUST00000138873ENSMUST00000139045
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037210 9.804±0.18 2.902±0.00 12.308±2.88 9.631±3.15 5.086±0.82 2.132±0.76 13.386±1.36 12.390±1.04 11.099±4.72 3.199±0.73 14.625±0.73 8.282±5.53 3.131±1.30 3.907±1.77
ENSMUST00000123858 N/A N/A N/A 0.772±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.817±0.00 N/A
ENSMUST00000138873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.185±0.00
ENSMUST00000139045 15.234±4.59 7.300±1.39 14.612±5.13 12.216±8.86 10.831±2.33 6.019±0.41 9.113±1.05 8.141±1.26 13.919±1.92 8.111±0.14 4.187±0.41 14.201±3.46 2.266±1.31 3.321±0.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RB CIL_0007RB_0003 VISTA 2:71118479-71722071
CIL_0008A7 CIL_0008A7_0002 VISTA 2:71118555-71719483
CIL_0008C9 CIL_0008C9_0002 VISTA 2:71216484-71818219
CIL_0009AY CIL_0009AY_0002 VISTA 2:71227336-71828847
CIL_0008AZ CIL_0008AZ_0002 VISTA 2:71235378-71836557
CIL_0008B0 CIL_0008B0_0002 VISTA 2:71237156-71838581
CIL_0007JJ CIL_0007JJ_002C UCNEbase 2:71244754-71538420
CIL_0004K4 CIL_0004K4_0002 CGP 2:71388958-71525194
CIL_0004K6 CIL_0004K6_0002 CGP 2:71453276-71533981

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 ISS mitochondrion
GO:0006508 IEA proteolysis
GO:0046872 IEA metal ion binding
GO:0070006 IEA metalloaminopeptidase activity
GO:0070084 IEA protein initiator methionine removal

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019715 metap1d methionyl aminopeptidase type 1D (mitochondrial) protein_coding Danio_rerio
ENSG00000172878 METAP1D methionyl aminopeptidase type 1D (mitochondrial) protein_coding Homo_sapiens

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