C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 239
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042097 Zfp239 10090 + 6:117862100-117873291 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000079405 Zfp239-001 117863077-117873291 protein_coding
  ENSMUST00000112857 Zfp239-005 117863084-117870734 processed_transcript
  ENSMUST00000134619 Zfp239-003 117863077-117870739 processed_transcript
  ENSMUST00000136316 Zfp239-006 117862100-117870778 processed_transcript
  ENSMUST00000141657 Zfp239-004 117863084-117870467 processed_transcript
  ENSMUST00000150936 Zfp239-002 117863084-117869698 retained_intron
  ENSMUST00000172088 Zfp239-201 117863077-117872765 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079405ENSMUST00000112857ENSMUST00000134619ENSMUST00000150936ENSMUST00000172088
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079405 0.893±0.23 N/A 0.203±0.05 0.796±0.17 0.190±0.00 0.650±0.03 0.122±0.00 0.269±0.14 0.310±0.10 0.380±0.07 N/A 1.063±0.59 0.236±0.01 0.401±0.00
ENSMUST00000112857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.193±0.00 N/A N/A N/A
ENSMUST00000134619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.151±0.00 N/A N/A N/A
ENSMUST00000150936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.176±0.00 0.243±0.00 N/A
ENSMUST00000172088 0.706±0.67 0.606±0.07 0.466±0.03 3.548±1.20 0.748±0.24 2.826±1.01 0.052±0.03 0.657±0.13 0.565±0.57 0.200±0.01 0.173±0.05 1.336±0.56 0.847±0.51 1.795±1.13

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059109 si:dkeyp-113d7.1 zinc finger protein 391 protein_coding Danio_rerio

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