C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BEN domain containing 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042182 Bend6 10090 - 1:33852052-33907816 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000062289 Bend6-001 33852052-33907816 protein_coding
  ENSMUST00000115161 Bend6-003 33852052-33907790 protein_coding
  ENSMUST00000126724 Bend6-004 33863156-33883842 protein_coding
  ENSMUST00000129464 Bend6-002 33852052-33907790 protein_coding
  ENSMUST00000139700 Bend6-005 33873759-33883488 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062289ENSMUST00000115161ENSMUST00000126724ENSMUST00000129464
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062289 0.445±0.16 N/A 1.098±0.02 17.880±15.90 0.179±0.02 0.228±0.08 0.452±0.38 0.095±0.00 0.208±0.11 0.422±0.07 N/A 0.188±0.08 1.738±0.77 0.364±0.08
ENSMUST00000115161 0.622±0.35 0.252±0.02 N/A 1.116±0.00 0.309±0.19 0.247±0.00 0.036±0.00 0.123±0.04 0.080±0.04 N/A 0.051±0.01 0.118±0.08 1.157±0.00 0.353±0.12
ENSMUST00000126724 N/A N/A N/A N/A N/A 0.074±0.04 N/A 0.023±0.00 0.039±0.00 N/A N/A 0.028±0.00 N/A N/A
ENSMUST00000129464 0.521±0.00 0.220±0.08 N/A N/A 0.142±0.06 0.212±0.14 0.260±0.03 0.046±0.00 0.044±0.01 0.156±0.01 0.041±0.03 0.434±0.17 N/A 0.198±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087X CIL_00087X_0002 VISTA 1:33689736-34292240

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0001106 IGI RNA polymerase II transcription corepressor activity
GO:0003682 IDA chromatin binding
GO:0005634 IDA nucleus
GO:0045666 IMP positive regulation of neuron differentiation
GO:0045746 IDA negative regulation of Notch signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000151917 BEND6 BEN domain containing 6 protein_coding Homo_sapiens

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