C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mesoderm induction early response 1, family member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042570 Mier2 10090 - 10:79540245-79555199 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000062855 Mier2-002 79540245-79555091 protein_coding
  ENSMUST00000164895 Mier2-005 79548874-79554884 protein_coding
  ENSMUST00000165028 Mier2-001 79540245-79555199 protein_coding
  ENSMUST00000165778 Mier2-007 79548881-79555121 protein_coding
  ENSMUST00000165866 Mier2-008 79548906-79550809 protein_coding
  ENSMUST00000167183 Mier2-003 79548802-79555114 nonsense_mediated_decay
  ENSMUST00000167689 Mier2-006 79549636-79554605 protein_coding
  ENSMUST00000167760 Mier2-009 79541668-79544770 retained_intron
  ENSMUST00000168601 Mier2-011 79540921-79542165 retained_intron
  ENSMUST00000170018 Mier2-004 79549558-79555077 protein_coding
  ENSMUST00000170950 Mier2-010 79542467-79544352 processed_transcript
  ENSMUST00000172158 Mier2-201 79540246-79541960 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062855ENSMUST00000165028ENSMUST00000167760ENSMUST00000168601ENSMUST00000172158
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062855 N/A 8.020±2.19 N/A N/A N/A 5.308±1.03 N/A N/A 1.948±0.56 3.151±0.00 N/A 2.465±0.00 6.544±1.65 N/A
ENSMUST00000165028 6.111±2.56 6.205±0.53 8.416±0.96 19.064±5.36 7.844±2.06 8.568±1.80 3.495±0.97 4.437±0.90 3.064±1.20 5.436±0.95 3.057±0.86 14.800±5.29 12.167±7.16 3.859±0.41
ENSMUST00000167760 N/A N/A 8.293±0.00 4.807±0.00 4.935±0.00 N/A N/A N/A 3.484±0.00 N/A N/A 10.619±5.50 6.021±0.31 N/A
ENSMUST00000168601 4.946±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172158 10.372±3.62 24.623±2.86 6.325±0.90 28.050±14.35 19.607±3.71 18.361±3.30 3.536±0.98 5.761±2.12 4.954±1.66 10.993±1.48 N/A 36.851±3.85 4.370±0.80 2.907±0.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007I8 CIL_0007I8_0002 CGP 10:79526430-79555199
CIL_0008XG CIL_0008XG_0002 VISTA 10:79539861-80142369
CIL_0007EX CIL_0007EX_0002 CGP 10:79540245-79587331

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071413 mier2 mesoderm induction early response 1, family member 2 protein_coding Danio_rerio
ENSG00000105556 MIER2 mesoderm induction early response 1, family member 2 protein_coding Homo_sapiens

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