C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 63
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000043036 Ccdc63 10090 - 5:122108040-122138957 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058960 Ccdc63-001 122108040-122138062 protein_coding
  ENSMUST00000128101 Ccdc63-003 122125032-122132003 protein_coding
  ENSMUST00000132701 Ccdc63-004 122129898-122132003 protein_coding
  ENSMUST00000146235 Ccdc63-005 122134437-122138957 retained_intron
  ENSMUST00000152389 Ccdc63-002 122108085-122134815 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyLiverLungOvaryPlacentaENSMUST00000058960ENSMUST00000128101ENSMUST00000146235ENSMUST00000152389
Transcript ID Adipose Adrenal Brain Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000058960 N/A N/A N/A 0.030±0.00 N/A 0.013±0.00 0.075±0.00 0.074±0.00 0.067±0.05
ENSMUST00000128101 N/A N/A 0.051±0.00 0.155±0.06 N/A N/A N/A 0.261±0.00 0.080±0.00
ENSMUST00000146235 0.065±0.00 0.148±0.00 0.320±0.29 0.127±0.00 0.146±0.00 0.109±0.05 N/A 0.397±0.31 0.205±0.17
ENSMUST00000152389 0.035±0.00 0.035±0.00 0.014±0.01 N/A 0.030±0.01 0.006±0.00 0.092±0.03 0.082±0.04 0.035±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TJ CIL_0008TJ_0002 VISTA 5:121625608-122227679
CIL_000903 CIL_000903_0002 VISTA 5:121732502-122333355
CIL_0008YU CIL_0008YU_0002 VISTA 5:121792218-122394768
CIL_0001G2 CIL_0001G2_0002 CGP 5:121858387-122113472

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000173093 CCDC63 coiled-coil domain containing 63 protein_coding Homo_sapiens

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