C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spindle and centriole associated protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000043065 Spice1 10090 + 16:44347121-44388497 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000050897 Spice1-001 44347121-44388497 protein_coding
  ENSMUST00000126228 Spice1-008 44385384-44387143 retained_intron
  ENSMUST00000132663 Spice1-004 44348046-44367748 processed_transcript
  ENSMUST00000133168 Spice1-003 44370024-44385706 retained_intron
  ENSMUST00000135340 Spice1-006 44367721-44370773 retained_intron
  ENSMUST00000145663 Spice1-007 44370466-44373639 processed_transcript
  ENSMUST00000152425 Spice1-005 44367651-44370406 retained_intron
  ENSMUST00000155661 Spice1-002 44347414-44370768 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050897ENSMUST00000126228ENSMUST00000132663ENSMUST00000133168ENSMUST00000145663ENSMUST00000155661
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050897 0.697±0.08 N/A 2.997±0.85 1.095±0.57 0.440±0.02 N/A 0.202±0.03 0.536±0.14 1.143±0.46 0.717±0.10 0.447±0.13 1.357±0.07 0.764±0.46 0.897±0.27
ENSMUST00000126228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.930±0.00 5.936±0.00 3.866±0.02 N/A
ENSMUST00000132663 N/A N/A N/A 3.394±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.007±0.31 N/A
ENSMUST00000133168 3.098±0.94 3.697±0.67 10.393±0.00 4.047±1.86 3.596±0.63 5.084±0.51 1.377±0.24 2.463±0.53 2.173±1.54 4.517±0.74 1.143±0.38 8.515±2.47 3.436±0.55 4.479±1.41
ENSMUST00000145663 N/A N/A N/A N/A 2.035±0.00 N/A N/A N/A N/A N/A N/A 4.022±0.39 N/A N/A
ENSMUST00000155661 N/A N/A N/A N/A 1.832±0.00 N/A 0.663±0.00 N/A N/A N/A 0.979±0.00 3.681±0.22 1.388±0.14 2.049±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005813 IEA centrosome
GO:0005814 ISS centriole
GO:0005819 ISS spindle
GO:0046599 ISS regulation of centriole replication
GO:0051310 IEA metaphase plate congression
GO:0090307 ISS spindle assembly involved in mitosis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004647 spice1 spindle and centriole associated protein 1 protein_coding Danio_rerio
ENSG00000163611 SPICE1 spindle and centriole associated protein 1 protein_coding Homo_sapiens

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