C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: matrix metallopeptidase 1a (interstitial collagenase)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000043089 Mmp1a 10090 + 9:7464141-7476869 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034492 Mmp1a-201 7464141-7476869 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaTestisENSMUST00000034492
Transcript ID Placenta Testis
ENSMUST00000034492 3.757±2.34 0.010±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001553 IEA luteinization
GO:0001554 IEA luteolysis
GO:0004222 IEA metalloendopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IEA extracellular space
GO:0005737 IEA cytoplasm
GO:0006508 IEA proteolysis
GO:0008233 IDA peptidase activity
GO:0008270 IEA zinc ion binding
GO:0009612 IEA response to mechanical stimulus
GO:0010763 IEA positive regulation of fibroblast migration
GO:0014854 IEA response to inactivity
GO:0014911 IEA positive regulation of smooth muscle cell migration
GO:0030574 IEA collagen catabolic process
GO:0031012 IEA extracellular matrix
GO:0035690 IEA cellular response to drug
GO:0042493 IEA response to drug
GO:0071222 IEA cellular response to lipopolysaccharide
GO:0071283 IEA cellular response to iron(III) ion
GO:0071305 IEA cellular response to vitamin D
GO:0071312 IEA cellular response to alkaloid
GO:0071347 IEA cellular response to interleukin-1
GO:0071356 IEA cellular response to tumor necrosis factor
GO:0071375 IEA cellular response to peptide hormone stimulus
GO:0071407 IEA cellular response to organic cyclic compound
GO:0071498 IEA cellular response to fluid shear stress
GO:0071680 IEA response to indole-3-methanol

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000196611 MMP1 matrix metallopeptidase 1 (interstitial collagenase) protein_coding Homo_sapiens

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