C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 4930426D05 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000043168 4930426D05Rik 10090 + 18:21651448-21656105 pseudogene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000127684 4930426D05Rik-001 21651581-21655046 unitary_pseudogene
  ENSMUST00000132729 4930426D05Rik-005 21651565-21655141 processed_transcript
  ENSMUST00000139804 4930426D05Rik-004 21652563-21656105 processed_transcript
  ENSMUST00000143378 4930426D05Rik-003 21652560-21655157 processed_transcript
  ENSMUST00000144487 4930426D05Rik-002 21651448-21655148 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000127684ENSMUST00000139804ENSMUST00000143378ENSMUST00000144487
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000127684 N/A N/A N/A N/A N/A N/A N/A N/A 0.034±0.00 N/A N/A N/A N/A N/A
ENSMUST00000139804 N/A 68.743±11.83 5.714±0.00 0.273±0.00 1.232±0.57 0.174±0.07 0.040±0.00 N/A 0.036±0.02 0.169±0.03 0.277±0.00 3.615±0.98 0.013±0.00 N/A
ENSMUST00000143378 0.726±0.78 97.633±10.16 9.836±4.54 N/A 2.197±0.77 0.174±0.10 0.126±0.02 1.678±0.00 0.046±0.03 0.415±0.04 0.090±0.06 9.807±2.92 0.038±0.03 4.297±0.00
ENSMUST00000144487 1.562±1.42 61.961±5.15 8.889±0.00 N/A N/A 0.147±0.12 0.066±0.01 2.092±0.00 0.023±0.01 0.219±0.14 N/A 5.288±1.52 0.071±0.06 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000156 CIL_000156_0002 CGP 18:21550377-22171396
CIL_0007M0 CIL_0007M0_0003 UCNEbase 18:21573646-21996551

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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