C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA E130012A19 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000043439 E130012A19Rik 10090 - 11:97627389-97629702 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000052281 E130012A19Rik-001 97627389-97629702 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052281
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052281 0.367±0.22 2.942±0.60 0.423±0.11 7.997±7.33 1.497±0.58 1.302±0.18 0.217±0.05 0.452±0.09 0.827±0.26 3.089±0.84 0.777±0.27 1.264±0.39 46.601±25.56 0.208±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SQ CIL_0000SQ_0002 CGP 11:97509340-97629702
CIL_0005TD CIL_0005TD_0002 CGP 11:97627389-97685463

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0048663 IDA neuron fate commitment

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077318 C24H17orf96 chromosome 17 open reading frame 96 protein_coding Danio_rerio
ENSG00000273604 C17orf96 chromosome 17 open reading frame 96 protein_coding Homo_sapiens

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