C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 141
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000044033 Ccdc141 10090 - 2:77009902-77170636 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028406 Ccdc141-006 77044971-77170636 retained_intron
  ENSMUST00000049544 Ccdc141-001 77009902-77170635 protein_coding
  ENSMUST00000111833 Ccdc141-003 77161981-77170576 protein_coding
  ENSMUST00000131660 Ccdc141-004 77074761-77170610 retained_intron
  ENSMUST00000133503 Ccdc141-002 77132219-77170600 nonsense_mediated_decay
  ENSMUST00000154013 Ccdc141-005 77023387-77030650 retained_intron
  ENSMUST00000164114 Ccdc141-008 77009995-77170617 protein_coding
  ENSMUST00000175840 Ccdc141-007 77030648-77044080 retained_intron
  ENSMUST00000179467 Ccdc141-009 77030648-77044730 protein_coding
  ENSMUST00000179868 Ccdc141-011 77011547-77019917 protein_coding
  ENSMUST00000180261 Ccdc141-010 77015051-77022696 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028406ENSMUST00000049544ENSMUST00000133503ENSMUST00000154013ENSMUST00000164114ENSMUST00000175840
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.139±0.00 0.347±0.00
ENSMUST00000049544 N/A N/A 0.478±0.19 0.118±0.00 0.373±0.14 0.151±0.00 6.838±1.84 1.140±0.43 0.395±0.25 2.024±0.21 0.110±0.04 1.671±1.20 0.205±0.09 0.158±0.00
ENSMUST00000133503 N/A 1.493±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.994±0.00 0.706±0.00 0.345±0.00
ENSMUST00000164114 2.203±1.34 N/A 1.018±0.31 1.153±0.03 0.399±0.21 0.318±0.07 6.072±0.47 2.983±0.87 0.696±0.48 4.732±1.06 0.138±0.05 2.528±1.07 0.751±0.75 0.188±0.09
ENSMUST00000175840 N/A N/A N/A 0.494±0.00 0.548±0.00 0.776±0.18 N/A N/A N/A N/A N/A N/A 0.196±0.00 0.285±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000YW CIL_0000YW_0002 CGP 2:76703980-77170636
CIL_0004C3 CIL_0004C3_0003 CGP 2:77009902-77280592

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0021799 IMP cerebral cortex radially oriented cell migration
GO:0051642 IMP centrosome localization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091927 CCDC141 (1 of 2) coiled-coil domain containing 141 protein_coding Danio_rerio
ENSDARG00000095675 CCDC141 (2 of 2) coiled-coil domain containing 141 protein_coding Danio_rerio
ENSG00000163492 CCDC141 coiled-coil domain containing 141 protein_coding Homo_sapiens

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