C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA A830010M20 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000044060 A830010M20Rik 10090 + 5:107497378-107580596 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000060553 A830010M20Rik-004 107497779-107510208 protein_coding
  ENSMUST00000100951 A830010M20Rik-001 107497378-107511207 protein_coding
  ENSMUST00000112671 A830010M20Rik-201 107497745-107512556 protein_coding
  ENSMUST00000133800 A830010M20Rik-005 107503943-107507222 processed_transcript
  ENSMUST00000143074 A830010M20Rik-002 107507621-107580596 protein_coding
  ENSMUST00000152474 A830010M20Rik-003 107497776-107507090 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100951ENSMUST00000112671ENSMUST00000143074ENSMUST00000152474
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100951 0.938±0.16 0.655±0.11 N/A 10.312±6.57 0.797±0.17 1.071±0.25 N/A 0.566±0.11 0.424±0.15 0.718±0.15 0.907±0.13 1.142±0.32 N/A 4.461±0.25
ENSMUST00000112671 N/A 0.475±0.00 N/A 3.938±1.48 0.499±0.06 N/A 0.332±0.01 0.315±0.04 0.344±0.17 0.315±0.00 N/A 0.661±0.00 N/A N/A
ENSMUST00000143074 0.862±0.13 0.571±0.05 1.802±0.00 11.994±1.93 0.812±0.21 0.603±0.11 0.789±0.10 0.768±0.14 0.666±0.38 0.651±0.16 N/A 1.673±1.03 2.434±0.92 11.679±4.18
ENSMUST00000152474 N/A N/A N/A 47.044±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DI CIL_0008DI_0002 VISTA 5:106921760-107524214
CIL_0008YV CIL_0008YV_0002 VISTA 5:106950899-107552442
CIL_0005ZT CIL_0005ZT_0002 CGP 5:107437997-107580596
CIL_0005ZU CIL_0005ZU_0002 CGP 5:107497378-107580596

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075907 si:ch73-389b16.2 si:ch73-389b16.2 protein_coding Danio_rerio
ENSG00000069712 KIAA1107 KIAA1107 protein_coding Homo_sapiens

Loading