C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cDNA sequence BC024139
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000044361 BC024139 10090 - 15:76119517-76126596 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000054022 BC024139-003 76119520-76126542 protein_coding
  ENSMUST00000089654 BC024139-002 76119521-76126556 protein_coding
  ENSMUST00000126892 BC024139-004 76122809-76126071 processed_transcript
  ENSMUST00000146157 BC024139-001 76119517-76126596 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054022ENSMUST00000089654ENSMUST00000126892ENSMUST00000146157
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054022 N/A N/A 1.215±0.29 0.070±0.00 0.408±0.10 0.023±0.01 0.248±0.38 0.124±0.00 0.021±0.00 0.130±0.03 0.017±0.00 0.029±0.00
ENSMUST00000089654 0.244±0.00 0.026±0.00 1.688±0.51 0.069±0.04 0.549±0.21 N/A 0.273±0.30 0.107±0.06 0.021±0.00 0.256±0.10 0.057±0.03 0.402±0.32
ENSMUST00000126892 0.071±0.00 0.016±0.00 N/A N/A N/A 0.014±0.00 0.167±0.19 0.029±0.00 N/A 0.094±0.03 0.003±0.00 N/A
ENSMUST00000146157 0.094±0.00 N/A 1.223±0.04 0.056±0.00 N/A N/A N/A N/A N/A 0.197±0.03 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0002 VISTA 15:75534812-76135772
CIL_0007SS CIL_0007SS_0002 VISTA 15:76102685-76704351

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0007050 IEA cell cycle arrest
GO:0008150 ND biological_process

Homologs

No Homologs available.

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