C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tubulin tyrosine ligase-like family, member 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000045467 Ttll13 10090 + 7:80246376-80260821 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058266 Ttll13-001 80246376-80260821 protein_coding
  ENSMUST00000107381 Ttll13-002 80246555-80259195 retained_intron
  ENSMUST00000133958 Ttll13-003 80246994-80252882 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058266ENSMUST00000107381ENSMUST00000133958
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058266 0.106±0.03 0.225±0.07 0.171±0.04 0.126±0.04 0.215±0.10 0.128±0.04 0.046±0.00 0.220±0.13 0.102±0.04 0.167±0.05 0.028±0.01 0.436±0.14 0.221±0.21 101.482±23.16
ENSMUST00000107381 0.085±0.02 0.048±0.00 0.139±0.00 0.060±0.03 0.078±0.01 N/A 0.063±0.01 0.407±0.00 0.074±0.05 0.110±0.00 0.067±0.02 0.147±0.03 0.063±0.00 55.462±3.70
ENSMUST00000133958 0.109±0.00 0.139±0.00 0.195±0.00 0.133±0.06 0.167±0.04 0.084±0.00 0.076±0.00 N/A 0.068±0.01 N/A 0.056±0.02 0.407±0.14 0.178±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AY CIL_0008AY_0002 VISTA 7:80145068-80746500
CIL_0003GZ CIL_0003GZ_0002 CGP 7:80232867-80260821
CIL_0003H1 CIL_0003H1_0002 CGP 7:80246376-80265374

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006464 IEA cellular protein modification process
GO:0008150 ND biological_process
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000261147 RP11-697E2.6 Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000456615} protein_coding Homo_sapiens

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