C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: shadow of prion protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000045733 Sprn 10090 - 7:140150628-140154877 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000059241 Sprn-001 140150628-140154877 protein_coding
  ENSMUST00000156791 Sprn-002 140150964-140153541 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonLiverOvaryPlacentaENSMUST00000059241
Transcript ID Adipose Adrenal Bladder Brain Colon Liver Ovary Placenta
ENSMUST00000059241 1.396±0.12 0.674±0.07 3.057±0.51 14.219±12.95 0.639±0.11 0.760±0.04 1.615±0.31 0.660±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000BH CIL_0000BH_0002 CGP 7:140125657-140150786
CIL_00001F CIL_00001F_0002 CGP 7:140137564-140154877

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IDA nucleic acid binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0006606 IMP protein import into nucleus
GO:0016020 IDA membrane
GO:0031225 IEA anchored component of membrane
GO:0031982 IDA vesicle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000203772 SPRN shadow of prion protein homolog (zebrafish) protein_coding Homo_sapiens

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