C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LYR motif containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000045854 Lyrm2 10090 + 4:32800253-32801559 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000062802 Lyrm2-001 32800253-32801383 protein_coding
  ENSMUST00000130321 Lyrm2-003 32800282-32800975 retained_intron
  ENSMUST00000135833 Lyrm2-002 32800279-32801559 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062802ENSMUST00000130321ENSMUST00000135833
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062802 4.037±1.26 3.753±0.00 20.826±2.37 18.569±11.33 3.136±0.00 1.741±0.89 5.335±1.84 9.196±1.83 9.143±6.91 4.517±0.38 7.472±0.85 6.717±7.94 14.462±6.58 7.043±1.26
ENSMUST00000130321 N/A N/A N/A N/A N/A 0.573±0.24 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135833 N/A 6.522±1.50 4.664±0.00 3.887±0.57 2.781±0.68 1.143±0.44 N/A N/A 1.646±1.25 1.631±0.35 N/A 3.741±1.75 3.615±0.14 1.699±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00015O CIL_00015O_0002 CGP 4:32800253-32950841

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033138 lyrm2 LYR motif containing 2 protein_coding Danio_rerio
ENSG00000083099 LYRM2 LYR motif containing 2 protein_coding Homo_sapiens

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