C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: poly(A) binding protein interacting protein 2B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000045896 Paip2b 10090 - 6:83805401-83831741 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058383 Paip2b-001 83805401-83831741 protein_coding
  ENSMUST00000125493 Paip2b-004 83808656-83810198 processed_transcript
  ENSMUST00000142806 Paip2b-002 83812857-83831713 retained_intron
  ENSMUST00000145593 Paip2b-003 83809712-83831713 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058383ENSMUST00000145593
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058383 4.734±2.54 5.851±0.91 6.280±3.08 11.917±6.58 5.748±2.09 4.062±0.70 5.944±3.56 4.779±1.48 2.844±1.86 9.190±0.54 19.795±11.41 9.530±2.54 6.623±2.87 3.183±0.48
ENSMUST00000145593 N/A N/A N/A N/A N/A N/A N/A N/A 4.200±0.00 N/A N/A 25.673±0.00 N/A 46.461±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003C3 CIL_0003C3_0002 CGP 6:83805401-83986869

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000900 ISS translation repressor activity, nucleic acid binding
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008143 ISO poly(A) binding
GO:0017148 ISO negative regulation of translation
GO:0045947 ISS negative regulation of translational initiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008706 paip2b poly(A) binding protein interacting protein 2B protein_coding Danio_rerio
ENSG00000124374 PAIP2B poly(A) binding protein interacting protein 2B protein_coding Homo_sapiens

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