C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: eukaryotic translation initiation factor 4, gamma 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000045983 Eif4g1 10090 + 16:20668313-20692884 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044783 Eif4g1-001 20672723-20692884 protein_coding
  ENSMUST00000073840 Eif4g1-201 20672749-20692881 protein_coding
  ENSMUST00000115457 Eif4g1-003 20672823-20692884 protein_coding
  ENSMUST00000115460 Eif4g1-011 20673517-20692881 protein_coding
  ENSMUST00000115461 Eif4g1-004 20673420-20692883 protein_coding
  ENSMUST00000115463 Eif4g1-002 20672746-20692883 protein_coding
  ENSMUST00000128594 Eif4g1-009 20672770-20683842 processed_transcript
  ENSMUST00000128840 Eif4g1-020 20668315-20678925 processed_transcript
  ENSMUST00000129958 Eif4g1-017 20688978-20689664 retained_intron
  ENSMUST00000132320 Eif4g1-006 20678276-20692881 retained_intron
  ENSMUST00000136106 Eif4g1-015 20678406-20679585 processed_transcript
  ENSMUST00000136713 Eif4g1-018 20673439-20678663 processed_transcript
  ENSMUST00000137690 Eif4g1-016 20681039-20681733 retained_intron
  ENSMUST00000140576 Eif4g1-019 20672823-20679271 protein_coding
  ENSMUST00000141034 Eif4g1-013 20673814-20678659 protein_coding
  ENSMUST00000142344 Eif4g1-010 20672749-20683836 protein_coding
  ENSMUST00000143939 Eif4g1-007 20672755-20692883 processed_transcript
  ENSMUST00000150333 Eif4g1-008 20672771-20683842 processed_transcript
  ENSMUST00000151679 Eif4g1-014 20674111-20678674 protein_coding
  ENSMUST00000154594 Eif4g1-021 20668313-20679395 processed_transcript
  ENSMUST00000154950 Eif4g1-012 20673398-20677798 protein_coding
  ENSMUST00000156226 Eif4g1-005 20673295-20692884 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044783ENSMUST00000073840ENSMUST00000115457ENSMUST00000115461ENSMUST00000128594ENSMUST00000132320ENSMUST00000136106ENSMUST00000142344ENSMUST00000156226
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044783 N/A N/A N/A 36.847±9.75 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000073840 59.615±1.23 24.199±2.98 N/A 14.927±6.12 41.297±5.53 38.388±6.70 24.461±3.89 29.797±3.53 39.837±11.41 36.679±6.46 35.822±8.85 47.267±13.63 52.973±36.83 17.877±4.63
ENSMUST00000115457 N/A N/A N/A N/A N/A N/A N/A N/A 12.576±0.00 N/A N/A 32.934±0.00 N/A N/A
ENSMUST00000115461 27.566±1.15 19.829±4.84 17.013±1.49 15.881±4.94 23.986±3.35 27.848±4.17 15.503±4.51 15.627±5.40 21.242±9.95 17.153±2.04 41.251±5.65 30.119±5.76 27.216±10.67 N/A
ENSMUST00000128594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.960±0.00 83.821±27.75 26.692±0.00
ENSMUST00000132320 N/A N/A N/A 13.586±0.56 N/A N/A N/A N/A N/A N/A N/A N/A 23.154±0.00 49.853±20.29
ENSMUST00000136106 N/A N/A N/A N/A 139.690±2.03 152.942±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142344 N/A 21.622±3.54 N/A N/A 25.300±0.35 20.162±2.16 14.515±0.00 N/A 21.802±1.83 19.680±1.96 N/A N/A N/A N/A
ENSMUST00000156226 N/A N/A N/A 65.182±0.00 22.781±0.00 N/A N/A N/A N/A N/A N/A 79.398±0.00 143.458±54.31 32.951±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000572 CIL_000572_0002 CGP 16:20651652-20692884
CIL_00056Z CIL_00056Z_0002 CGP 16:20668313-20703048

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003743 IEA translation initiation factor activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0006413 IEA translational initiation
GO:0006446 IEA regulation of translational initiation
GO:0008190 IEA eukaryotic initiation factor 4E binding
GO:0016020 IEA membrane
GO:0016281 IEA eukaryotic translation initiation factor 4F complex
GO:0030324 IEA lung development
GO:0044822 IEA poly(A) RNA binding
GO:0045471 IEA response to ethanol

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006200 EIF4G1 (1 of 3) eukaryotic translation initiation factor 4 gamma, 1 protein_coding Danio_rerio
ENSDARG00000075801 EIF4G1 (2 of 3) eukaryotic translation initiation factor 4 gamma, 1 protein_coding Danio_rerio
ENSDARG00000077766 CABZ01085054.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000114867 EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 protein_coding Homo_sapiens

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