C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: retinitis pigmentosa 1 homolog (human)-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046049 Rp1l1 10090 + 14:63992431-64033504 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058229 Rp1l1-201 63992431-64033504 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastHeartLungMuscleOvaryPlacentaTestisENSMUST00000058229
Transcript ID Adipose Bladder Breast Heart Lung Muscle Ovary Placenta Testis
ENSMUST00000058229 0.004±0.00 0.006±0.00 0.011±0.01 0.005±0.00 0.009±0.00 0.011±0.00 0.059±0.03 0.008±0.01 0.027±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZS CIL_0006ZS_0002 CGP 14:63971122-64033504

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001750 IDA photoreceptor outer segment
GO:0003674 ND molecular_function
GO:0005856 IEA cytoskeleton
GO:0005930 IDA axoneme
GO:0007601 IEA visual perception
GO:0030030 IEA cell projection organization
GO:0032391 IDA photoreceptor connecting cilium
GO:0035556 IEA intracellular signal transduction
GO:0042461 IMP photoreceptor cell development
GO:0045494 IMP photoreceptor cell maintenance

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088377 RP1L1 (1 of 2) retinitis pigmentosa 1-like 1 protein_coding Danio_rerio
ENSDARG00000089458 rp1l1 retinitis pigmentosa 1-like 1 protein_coding Danio_rerio
ENSG00000183638 RP1L1 retinitis pigmentosa 1-like 1 protein_coding Homo_sapiens

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