C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: syntaxin binding protein 6 (amisyn)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046314 Stxbp6 10090 - 12:44852488-45074493 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053768 Stxbp6-001 44855221-45074493 protein_coding
  ENSMUST00000120531 Stxbp6-002 44852488-45074112 protein_coding
  ENSMUST00000130202 Stxbp6-005 44861365-45012964 processed_transcript
  ENSMUST00000139750 Stxbp6-004 45012932-45074318 nonsense_mediated_decay
  ENSMUST00000143376 Stxbp6-003 44902877-45074154 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053768ENSMUST00000120531ENSMUST00000139750
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053768 3.528±0.87 9.823±2.02 3.582±0.03 1.769±0.05 3.785±1.77 15.482±1.65 1.079±0.25 5.165±0.35 4.217±0.94 9.095±3.60 N/A 14.637±7.04 2.668±2.91 1.350±0.65
ENSMUST00000120531 0.603±0.06 N/A 4.113±0.00 2.363±0.43 1.370±0.63 2.036±0.51 N/A 0.832±0.01 1.325±0.19 3.336±0.00 0.989±0.00 4.634±2.72 0.978±0.99 0.471±0.31
ENSMUST00000139750 N/A 13.526±2.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EO CIL_0005EO_0002 CGP 12:44852488-46818775

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport
GO:0035542 IEA regulation of SNARE complex assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088862 STXBP6 syntaxin binding protein 6 (amisyn) protein_coding Danio_rerio
ENSG00000168952 STXBP6 syntaxin binding protein 6 (amisyn) protein_coding Homo_sapiens

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