C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: developmental pluripotency-associated 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046323 Dppa3 10090 + 6:122626410-122630272 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049644 Dppa3-001 122626410-122630272 protein_coding
  ENSMUST00000123429 Dppa3-002 122626753-122630272 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000049644ENSMUST00000123429
Transcript ID Adipose Bladder Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000049644 N/A N/A N/A 0.023±0.01 N/A 3.712±5.39 0.022±0.01 0.120±0.00
ENSMUST00000123429 0.148±0.00 0.041±0.00 0.078±0.00 0.061±0.05 0.061±0.00 0.468±0.00 0.098±0.06 0.102±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HL CIL_0008HL_0002 VISTA 6:122092605-122696323
CIL_00001B CIL_00001B_0002 CGP 6:122605403-122630272

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001939 IDA female pronucleus
GO:0001940 IDA male pronucleus
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0016568 IEA chromatin modification
GO:0035064 IMP methylated histone binding
GO:0040016 IMP embryonic cleavage
GO:0044726 IMP protection of DNA demethylation of female pronucleus
GO:1901536 IMP negative regulation of DNA demethylation
GO:2000653 IMP regulation of genetic imprinting

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000187569 DPPA3 developmental pluripotency associated 3 protein_coding Homo_sapiens

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