C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spermatogenesis associated 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000047030 Spata2 10090 - 2:167481133-167492887 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000057627 Spata2-001 167481133-167492887 protein_coding
  ENSMUST00000109211 Spata2-002 167481433-167492845 protein_coding
  ENSMUST00000126389 Spata2-003 167485355-167492872 processed_transcript
  ENSMUST00000147051 Spata2-006 167484520-167485830 retained_intron
  ENSMUST00000154770 Spata2-004 167485513-167492878 processed_transcript
  ENSMUST00000155875 Spata2-005 167485406-167492845 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057627ENSMUST00000109211
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057627 9.537±0.43 13.172±3.16 6.495±0.85 11.039±4.18 11.999±2.23 24.739±1.09 4.967±0.99 11.275±1.60 4.667±1.42 10.435±1.18 4.878±0.95 12.725±4.56 6.292±2.96 6.529±0.25
ENSMUST00000109211 N/A N/A N/A 9.200±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I4 CIL_0008I4_0002 VISTA 2:167024358-167627099
CIL_00087E CIL_00087E_0002 VISTA 2:167269881-167871243
CIL_0001VJ CIL_0001VJ_0002 CGP 2:167421712-167492887
CIL_00027D CIL_00027D_0002 CGP 2:167481133-167516173

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063250 spata2 spermatogenesis associated 2 protein_coding Danio_rerio
ENSG00000158480 SPATA2 spermatogenesis associated 2 protein_coding Homo_sapiens

Loading